Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840031.1_cds_XP_016507477.1_20595
CDS Infomation

[gene=LOC107825162] [db_xref=GeneID:107825162] [protein=IAA-amino acid hydrolase ILR1-like 4] [protein_id=XP_016507477.1] [location=complement(join(8085..8492,8634..8762,9330..9644,11071..11196,12132..12491))] [gbkey=CDS]
Sequence

ATGGGTTTCTTGAAATGGGTTCTTGCCATTTTCACTCTATGCACATATTTAGCAACACCC
ACCTTATCAGATTCTTTATTGAACAAAGATGAGTTAGCCAGTATTTCAGCCAATTTCTTG
AATTTGGCCAAAAGAACAGACCTTTTTGATTGGATGGTGAAAATTAGGAGGACTATACAT
GAAAATCCTGAGTTGGGATTTGAGGAATTTGAGACTAGTAAACTTATCAGAAATGAGCTT
GATAAAATGGGAATTTATTACAAGTACCCTGTAGCTGTTACTGGTGTAGTTGGTTTTATT
GGTACTGGAAAATCACCTTTTGTTGCTCTTAGAGCTGATATGGATGCTCTTCCTATGCAG
GAGGAAGTGGAATGGGAGCATAAGAGTAAAATTCCGGGCAAAATGCATGCTTGTGGACAC
GACGCCCATGTTGCTATGCTTCTGGGTGCTGCAAGGATTCTTCAGGAGCAGCGCGATTAT
TTGCAGGGAACTGTTCTTCTGGTTTTTCAGCCAGCTGAGGAGGGAGGTGGAGGAGCAAAG
AAAATGCTTGAATCTGGGGTACTTGATAATGTCGATGCCATCTTTGGTCTGCATATTTCT
GCCGTTCATCCTATTGGCACTGTTACCGCCAATTCTGGCCCTATCATGGCTGGCAGTGGC
TTCTTTGAGGCGGTAATAAAGGGGAAAGGTGGTCATGCCGCAATTCCTCAGCACACTATA
GATCCAATCTTAGCAGCTTCTAACATTATAGTTAGTTTGCAACATCTTGTTTCACGGGAA
GCCGATCCCTTGGATTCACAGGTTGTTACGGTTGCAAAGTTCAAAGGTGGCGGCGCATTT
AATGTTATACCTGACTCTGTCACAATCGGTGGAACTTTCAGGGCATTCTCAAAAGAAAGT
TTCACGCAACTTAAACAGAGAATCGTTGAGGTTATCACACGTCAAGCTGCCGTACAAAGG
TGCAACACAACAGTTGACTTTGATACTGAAAATAGGCCGTTTTACCCGGTGACAGTAAAT
AATAAAGCTTTGCATGAACATTTTCGAGATGTAGCTGCACAGATGCTGGGCAATGACAAG
ATCATAGAAAAGAAACCCACTATGGGGACAGAAGATTTTTCATTCTTTGCTGAGGCTTTT
CCTGGATACTTCTATTTACTTGGAATGGTGGATGAAACTAAAGGACGATTCGAGTCAGGT
CACAACCCTTTCTACAGAGTCAATGAAGATGCACTTCCATATGGTGCTGCGTTACATGCA
TCCTTAGCCACGACATATCTTCTCGAACATCAGGTGAAAGCAACCACTCAGGATCGAAAT
GTTCGTGATGAGTTGTAA

Peptide Sequence

PEP ID

XP_016507477.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Nicotiana tabacum]
Sequence

MGFLKWVLAIFTLCTYLATPTLSDSLLNKDELASISANFLNLAKRTDLFDWMVKIRRTIH
ENPELGFEEFETSKLIRNELDKMGIYYKYPVAVTGVVGFIGTGKSPFVALRADMDALPMQ
EEVEWEHKSKIPGKMHACGHDAHVAMLLGAARILQEQRDYLQGTVLLVFQPAEEGGGGAK
KMLESGVLDNVDAIFGLHISAVHPIGTVTANSGPIMAGSGFFEAVIKGKGGHAAIPQHTI
DPILAASNIIVSLQHLVSREADPLDSQVVTVAKFKGGGAFNVIPDSVTIGGTFRAFSKES
FTQLKQRIVEVITRQAAVQRCNTTVDFDTENRPFYPVTVNNKALHEHFRDVAAQMLGNDK
IIEKKPTMGTEDFSFFAEAFPGYFYLLGMVDETKGRFESGHNPFYRVNEDALPYGAALHA
SLATTYLLEHQVKATTQDRNVRDEL

Transcript Sequence

Gene sequence data has not been registered.